Drug Repurposing for Antivirals

Applications of AI/ML in Drug Repurposing for Antiviral Therapy

Author(s): Chayanta Sen, Pankaj Paul, Ankit Tiwari, Durbadal Ojha, Ahana Hazra, Nahid Zaman, Khubaib Akhtar Khan, Pijush Kanti Shit and Amalesh Samanta *

Pp: 154-200 (47)

DOI: 10.2174/9798898811143125010008

* (Excluding Mailing and Handling)

Abstract

Recent advancements in artificial intelligence have made strides in all aspects of human life. The drug development process has enhanced significantly, especially during the COVID-19 period. AI has made the in-silico methods even faster and more accurate, which are now more capable of guiding the initial stages of drug discovery. AI-based protein structure prediction has made it possible to avail the dynamic structure 3D of proteins, which is not possible through crystallography or other wet lab techniques. Advanced AI algorithms are being developed to cater to the specific characteristics of ligands, proteins, and different steps of drug development. With time, more relevant data are becoming available, which will improve AI-based experiments even further. This chapter has enlisted computational methods used with AI and how they differ from the traditional physics-based approaches. Under this framework, the chapter aims to gain insight into the primary research on drug repurposing for application in the treatment of viral infection using AI and ML techniques. Suramin, a polyanionic sulfonate antiparasitic drug, showed potential antiviral activities in the Zika virus (ZIKV) infection. Likewise, Sofosbuvir, a viral protease inhibitor primarily used for anti-hepatitis C virus infection, can be reused as a prophylactic treatment in SARS-CoV-2.


Keywords: Computational Chemistry, De Novo Protein Design, De Novo Drug Discovery, Deep Learning, Generative AI, Machine Learning, Machine Learning Force Fields, SARS-CoV-2., Virtual Screening, Zika Virus.

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