Methods and Techniques in Nematology

Basic Bioinformatics in Nematology

Author(s): Ebrahim Shokoohi *

Pp: 81-97 (17)

DOI: 10.2174/9789815313680125010011

* (Excluding Mailing and Handling)

Abstract

Bioinformatics is the interdisciplinary study of nucleic acid and protein sequences, which has proven especially useful for genomics, gene expression, and nematode diagnosis. Quality control of these sequences is essential, and bioinformatics plays a crucial role in their processing for phylogenetic analysis. Skilled analysis is particularly vital for molecular ecology and environmental DNA analysis, especially when working with next-generation sequences. Furthermore, the utilization of an online database and specialized software designed for the identification of nematode species serves as valuable resources for a proper diagnosis of nematode-related issues. In this chapter, we will explore the bioinformatics of Sanger sequencing, with an emphasis on the phylogenetic study of nematodes and online species identification of nematode species. 


Keywords: Bioinformatics, DNA, Nematodes, Phylogeny, Sanger sequencing.