Selections
from 'Current Pharmacogenomics and Personalized
Medicine'
Professor Vural Ozdemir, Centre of Genomics
and Policy, Department of Human Genetics, Faculty
of Medicine, McGill University, Canada
Dear Reader,
The Current Pharmacogenomics and Personalized
Medicine (CPPM: www.benthamscience.com/cppm)
June 2010 issue features eight papers that address:
- Epigenetic epidemiology and human methylome
variation,
- Science communication on genome-based personalized
medicine in Asia-Pacific,
- Septomics – i.e., convergence of large scale
biology and sepsis research,
- Systems pathology and applications in prostate
cancer,
- Original research on a nation-wide survey
on attitudes towards pharmacogenomics research
and a DNA bank in Japan,
- Stent thrombosis and personalizing clopidogrel
therapy,
- Pharmacogenomics in forensic medicine,
- A comprehensive inventory of human genetic
variation in Phase 2 drug metabolism (specifically,
glucuronidation) by UDP-glucuronosyltransferases.
CPPM is a multidisciplinary integrated
forum addressing both pharmacogenomics and personalized
medicine [1]. The Journal aims to address the
previously unmet needs in the literature, for
example, by moving beyond the artificial compartmentalization
of biomarkers and knowledge across health technologies
and disciplinary silos. Articles in the CPPM June
2010 issue draw from international expertise in
the field and attest to the increasingly globalized
nature of pharmacogenomics and personalized medicine
research, and the diverse technologies and stakeholders
that collectively drive this rapidly evolving
knowledge frontier in biomedicine.
The following is a synopsis of the articles presented
in the June 2010 issue of the Journal. This account
is preceded by a brief historical context on pharmacogenomics
and personalized medicine to better appreciate
and situate these advances in a broader longitudinal
context. We cannot fully understand the present,
nor anticipate the future, without a firm grasp
of the past.
Pharmacogenomics
and Personalized Medicine: Past, Present and Future
Pharmacogenomics is a term introduced in late
1990s and is broadly defined as the study of variability
in drug safety and efficacy using information
from the entire genome of a patient. The origins
of pharmacogenomics, however, date to 1950s when
monogenic variations in drug metabolism and pharmacokinetics
were the primary focus of research. Some suggest
that the field of pharmacogenomics and personalized
medicine is rooted in the early observations of
Pythagoras in Croton (Calabria region), Italy
in 510 BCE [2, 3]. Pythagoras has noted that the
ingestion of fava beans resulted in a potentially
fatal reaction in some, but not all, individuals.
The scientific basis of this adverse reaction
to food, that is, favism, was the inherited deficiency
of glucose-6-phosphate dehydrogenase [4], one
of the early documented accounts of metabolic
genetic polymorphism.
Today, pharmacogenomics and personalized medicine
demand expertise not only in genomics but also
a deep understanding of the cross-cutting issues
(e.g., social, ethical, legal and economic) emerging
from biotechnology applications in healthcare
towards personalized medicine [1]. Moreover, past
innovation frameworks in genomics based on “one
genome per person” are being contested [5]. As
noted by Kato and colleagues [6], a conceptual
shift is now taking place with the introduction
of the Human Microbiome Project [7] that aims
to characterize the genomes of the millions of
microbacteria that cohabit within each person
-- human body is cohabited by at least 10 times
more microorganisms (e.g., on the skin and intestinal
lumen) than the number of human cells in the body.
A sole focus on the human genome might inadvertently
miss out valuable information on such ecosystems
in which drugs and other health interventions
produce their highly variable effects on the human
body. This broader outlook is essential for understanding
the genome-environment interactions, a core element
of the personalized medicine research agenda.
Globalization of genomics research brings about
further complexities and opportunities on the
critical path to personalized medicine [1, 8-11].
Technical capacity for high throughput sequencing
of the genomes indeed increased enormously [5],
including in low and middle income countries (LMICs).
It can be anticipated that a sizable portion of
the future discoveries in the postgenomics era
will be made by researchers in LMICs. On the other
hand, data analytical frameworks and appropriately
trained interdisciplinary personnel who can interpret
genomics data in a manner that is biologically
and clinically meaningful are still scarce. Even
more challenging is how best to evaluate emerging
genomics data through the lens of global public/population
health while responsibly anticipating and addressing
the attendant social, ethical and policy issues
[12, 13]. Hence, credible science communication
and provision of impartial evidence on genomic
applications are some of the most important elements
of the agenda in personalized medicine in the
postgenomics era [1, 6, 12-14]. To these ends,
the following eight papers in the CPPM June issue
make a timely contribution to the literature on
pharmacogenomics and personalized medicine.
|